File S1 - Paradigm of Tunable Clustering Using Binarization of Consensus Partition Matrices (Bi-CoPaM) for Gene Discovery

Additional analysis for synthetic as well as real yeast cyclic datasets by the random periods model (RPM). This Supplementary File consists of two main sections. The first section provides the details of the experimental design as well as the results of a fairly comprehensive additional Bi-CoPaM experiment over a different synthetic dataset generated based on the RPM model. Separately, the second section shows an application of the RPM model to the results of our analysis of real yeast cell-cycle datasets in the main text; this provides additional validation to them, and therefore demonstrates the usefulness of the Bi-CoPaM method in such cases. (PDF)