Algal rhodopsins encoding diverse signal sequence holds potential for expansion of organelle optogenetics: Sequence dataset for analysis

Rhodopsin sequences were retrieved from the JGI Phycocosm database. Sequence retrieval was performed using reference sequences of well-characterized rhodopsins from the NCBI database. Sequence encoding at least five-transmembrane helices with conserved lysine in the seventh helix were considered further for sequence alignment, phylogenetic analysis, and the presence of cellular targeting signals.

从JGI Phycocosm数据库中检索到的视紫红质序列。序列检索是通过使用NCBI数据库中已表征的视紫红质参考序列进行的。编码至少五个跨膜螺旋且第七个螺旋中具有保守赖氨酸的序列被进一步考虑用于序列比对、系统发育分析和细胞靶向信号的存在性分析。