Distinct properties of cell type-specific and shared transcription factor binding sites

ChEBI2013-12-31 更新2026-07-21 收录

转录因子结合位点分析

细胞类型特异性

数据链接：

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Distinct properties of cell type-specific and shared transcription factor binding sites

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2013-12-31

Additional file 2 of BEDwARS: a robust Bayesian approach to bulk gene expression deconvolution with noisy reference signatures

基因表达分析

细胞类型特异性

Additional file 2: Table S2. Differential gene expression analysis for DPD deficiency. The summary of differential gene expression analysis using Limma package for bulk, pseudo-bulk, and deconvolved c

DataCite Commons2024-08-14 更新100

RFX7 DNA binding landscape in RPE-1

转录因子结合位点分析

ChIP-seq表观遗传学

Identification of the DNA binding landscape of the transcription factor regulatory factor X 7 (RFX7) in Nutlin-3a and DMSO control treated RPE-1 cells. Overall design: RFX7 ChIP-seq in Nutlin-3a and D

NIAID Data Ecosystem60

Interpretable deep learning reveals the sequence rules of Hippo signaling (ChIP-Seq). Interpretable deep learning reveals the sequence rules of Hippo signaling (ChIP-Seq)

Hippo信号通路

转录因子结合位点分析

How specific cells respond to signaling pathways is largely encoded in the DNA sequence. However, the sequence rules result from complex interactions between signaling and cell-type-specific transcrip

NIAID Data Ecosystem60

Genome-wide mapping of OsHOX24-binding sites in rice

植物胁迫响应

转录因子结合位点分析

In this study, we provide a global overview of genome-wide OsHOX24 binding sites in rice under control and desiccation stress conditions in wild-type and OsHOx24 overexpressing rice plants (H49 line)

NIAID Data Ecosystem70

Genome wide STAT3 binding analysis of primary human hepatocytes-derived organoids [ChIP-seq]. Genome wide STAT3 binding analysis of primary human hepatocytes-derived organoids [ChIP-seq]

转录因子结合位点分析

肝细胞类器官

To analyze the primary STAT3 binding sites induced by OSM, chromatin immunoprecipitation sequencing (ChIP-seq) was performed using an anti-human STAT3 antibody. HHOs were cultured in EM for 1 week and

NIAID Data Ecosystem60

Distinct properties of cell type-specific and shared transcription factor binding sites

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