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Additional data for: Contrasting patterns of longitudinal population dynamics and antimicrobial resistance mechanisms in two priority bacterial pathogens over seven years in a single center. Genome Research.

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DataCite Commons2020-08-26 更新2024-07-27 收录
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<b>Contrasting patterns of longitudinal population dynamics and antimicrobial resistance mechanisms in two priority bacterial pathogens over seven years in a single center. </b><b><br></b> Accession numbers and species/sub-species assignations given to the bacteria used in this study, represented as five collections in five tables. For bacteria sequenced in this study added associated metadata and key features (MLSTs and antimicrobial resistance gene detections) of the bacteria are given. <br> <b>Table S1. </b>Accession numbers, isolation site, study month of isolation, detected acquired resistance genes, antimicrobial resistance phenotypes, of <i>Klebsiella pneumoniae</i> in this study. <b><br></b><b>Table S2. </b>Accession numbers and metadata for the global <i>K. pneumoniae</i> collection (from: Holt KE, Wertheim H, Zadoks RN, Baker S, Whitehouse CA, Dance D, <i>et al</i>. Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in <i>Klebsiella pneumoniae</i>, an urgent threat to public health. Proc Natl Acad Sci U S A. 2015;112(27):E3574-81)<i>.</i> <b><br></b><b>Table S3. </b>Accession numbers and metadata for UK <i>K. pneumoniae </i>and <i>E. cloacae</i>(from: Moradigaravand D, Martin V, Peacock SJ, Parkhill J. Evolution and Epidemiology of Multidrug-Resistant <i>Klebsiella pneumoniae</i> in the United Kingdom and Ireland. MBio. 2017;8(1); Moradigaravand D, Reuter S, Martin V, Peacock SJ, Parkhill J. The dissemination of multidrug-resistant <i>Enterobacter cloacae</i> throughout the UK and Ireland. Nat Microbiol. 2016;1:16173)<i>.</i> <b><br></b><b>Table S4. </b>Accession numbers, isolation site, study month of isolation, detected acquired resistance genes, antimicrobial resistance phenotypes, of <i>Enterobacter cloacae </i>in this study. <b><br></b><b>Table S5. </b>Accession numbers and metadata for the global <i>E. cloacae </i>collection (from: Chavda KD, Chen L, Fouts DE, Sutton G, Brinkac L, Jenkins SG, <i>et al</i>. Comprehensive Genome Analysis of Carbapenemase-Producing <i>Enterobacter spp</i>.: New Insights into Phylogeny, Population Structure, and Resistance Mechanisms. MBio. 2016;7(6))<i>.</i> <b></b><i></i><sub></sub><sup></sup><br>
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2019-07-30
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