Sequencing data for "Identifying and tracking mobile elements..." by van Dijk et al. (2023)

The dataset contains the following directories: <strong>All_raw_MAGs</strong>: all cross-assembled MAGs per community, with a text file for their BAT annotation results. Cross-assembly was done by combining all time points. <br> <strong>Candidatus_Saccharibacterium_MAGs</strong>: identified nanobacterium MAGs from various communities. <br> <strong>Cellvibrio_MAGs</strong>: identified cellvibrio spp. across communities. <br> <strong>Cellvibrio_Plasmids:</strong> Cp plasmids belonging to Cellvibrio (C1) which transferred from communities 8 to 4, 6, 9, and 10 (in horizontal communities)<br> <strong>Interactive_Dataset:</strong> HTML5 (Plotly) graphs to explore all xenotypic sequences and MAG abundance plots<br> <strong>Rscript_mock_data</strong>: R script used to design the mock data for the benchmark set. And a single spreadsheet (<strong>Xenoseq_mastersheet.xlsx, </strong>Supplementary Table 1) of data discussed in the main text.