Phylogenomic datasets from "Resolving evolutionary relationships in lichen-forming fungi using diverse phylogenomic datasets and analytical approaches"

<br><b>100, 1kb data matrix</b> - svdquart+PAUP* (100_1kb_realPHY_v1_svdquart.nex): The ‘100, 1 kb loci’ dataset was comprised of 100, 1 kilobase loci selected from each of the 100 largest contigs in the <i>R. melanophthalma</i> reference genome assembly.<b>303 Core Eukaryotic Genes (CEGs)</b>(303_CEG_rhizoplaca_v1.nex): 303 Core Eukaryotic Genes (CEGs) that passed filtering requirements - from the original 430 core eukaryotic genes and associated introns, each with an average length of ca. 5500 base pairs/CEG.<b>'CEGMA' matrix</b> (FcC_smatrix.nex): The ‘CEGMA’ matrix included 430 core eukaryotic genes and associated introns, each with an average length of ca. 5500 base pairs/CEG<b>'REALPHY' dataset </b>(polymorphisms_move.phy): The ‘RealPhy’ dataset was constructed by mapping reads from all sampled specimens to the <i>R. melanophthalma</i> reference assembly using RealPhy v1.12<b>subset 'A' from the ‘100, 1 kb loci’ dataset </b>(25a_1kb_realPHY_v1_BEAST.nex): 25-locus subsets from the ‘100, 1 kb loci’ dataset: loci 1-25.<b>subset 'B' from the ‘100, 1 kb loci’ dataset </b>(25b_1kb_realPHY_v1_BEAST.nex): subset 'B' from the ‘100, 1 kb loci’ dataset: loci 26-50subset 'C' from the ‘100, 1 kb loci’ dataset (25c_1kb_realPHY_v1_BEAST.nex): subset 'C' from the ‘100, 1 kb loci’ dataset: loci 51-75.<b>subset 'D' from the ‘100, 1 kb loci’ dataset </b>(25d_1kb_realPHY_v1_BEAST.nex): subset 'D' from the ‘100, 1 kb loci’ dataset: loci 76-100<b>subset '1-50' from the ‘100, 1 kb loci’ dataset</b> (50a_1kb_realPHY_v2_BEAST.nex): subset from the ‘100, 1 kb loci’ dataset: loci 1-50<b>subset '51-100' from the ‘100, 1 kb loci’ dataset</b> (50a_1kb_realPHY_v2_BEAST.nex): subset from the ‘100, 1 kb loci’ dataset: loci 51-100