Macquarie perch Macquaria australasica DArT genotypes for Lutz et al 2021 Evolutionary Applications
收藏bridges.monash.edu2022-02-10 更新2025-03-25 收录
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Data used in the manuscript: Lutz, M., Z. Tonkin, J. D. Yen, G. Johnson, B. Ingram, J. Sharley, J. Lyon, D. G. Chapple, P. Sunnucks, and A. Pavlova. 2021. Using multiple sources during reintroduction of a locally extinct population benefits survival and reproduction of an endangered freshwater fish. Evolutionary Applications 14:950-964. doi.org/10.1111/eva.13173File “Report_DMacq19-4705_8_moreOrders_SNP_mapping_2.csv” is the genotyping file from Diversity Arrays Technology. It contains genotypes for 2672 Macquarie perch individuals, including those not used for this study.File “Metadata.txt” explains content of columns and rows in the genotyping file. File “Lutz_et_al_covariate_file.csv” is the covariate file used for manuscript (1) Lutz et al 2021. It comprises data on population, sex and capture year for each individual. Columns: id- individual identification, pop- population (Dart_F- Dartmouth female; Dart_M- Dartmouth male; Dart_U- Dartmouth individual of unknown sex; Yarr_F- Yarra female; Yarr_M- Yarra male; Yarr_U- Yarra individual of unknown sex; Ovens_2016, Ovens_2017 and Ovens_2018- individuals captured in the Ovens during the 2016, 2017 and 2018 monitoring, respectively; SnobsCreek- hatchery-produced individual born at Snobs Creek hatchery; dontuse- individual was not use in this study); sex- gender (M- male, F- female, U- unknown, #NA- not used in this study).
本研究中所使用的数据:Lutz, M., Z. Tonkin, J. D. Yen, G. Johnson, B. Ingram, J. Sharley, J. Lyon, D. G. Chapple, P. Sunnucks, 和 A. Pavlova. 2021. 在本地灭绝物种的再引入过程中,利用多种数据源有助于濒危淡水鱼的生存与繁殖。进化应用 14:950-964. doi.org/10.1111/eva.13173
文件“Report_DMacq19-4705_8_moreOrders_SNP_mapping_2.csv”为Diversity Arrays Technology生成的基因分型文件。其中包含2672名麦夸里鳅个体的基因型数据,包括本研究所未使用的个体。
文件“Metadata.txt”解释了基因分型文件中列和行的内容。
文件“Lutz_et_al_covariate_file.csv”是用于论文(Lutz等人,2021年)的协变量文件。它包含了每个个体的种群、性别和捕获年份的数据。列包括:id-个体识别码,pop-种群(Dart_F-达特茅斯雌性;Dart_M-达特茅斯雄性;Dart_U-达特茅斯未知性别个体;Yarr_F-雅拉雌性;Yarr_M-雅拉雄性;Yarr_U-雅拉未知性别个体;Ovens_2016, Ovens_2017 和 Ovens_2018-分别在2016年、2017年和2018年监测期间在Ovens捕获的个体;SnobsCreek-在Snobs Creek孵化场出生的孵化场生产个体;dontuse-未在本研究中使用的个体);sex-性别(M-男性,F-女性,U-未知,#NA-未在本研究中使用)。
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