File S1 - Whole-Genome Quantitative Trait Locus Mapping Reveals Major Role of Epistasis on Yield of Rice

Tables S1–S12. Table S1. Cross-validation for determining hyperparameters (a, b) used in QTL mapping for the number of panicles per plant. Table S2. Experimentally investigated genes near QTLs for the number of panicles per plant identified with the full model. Table S3. Experimentally investigated genes near QTLs for the number of panicles per plant identified with the main effect model. Table S4. Cross-validation for determining hyperparameters (a, b) used in QTL mapping for the number of grains per panicle. Table S5. Experimentally investigated genes near QTLs for the number of grains per panicle identified with the full model. Table S6. Experimentally investigated genes near QTLs for the number of grains per panicle identified with the main effect model. Table S7. Cross-validation for determining hyperparameters (a, b) used in QTL mapping for grain weight. Table S8. Experimentally investigated genes near QTLs for grain weight identified with the full model. Table S9. Experimentally investigated genes near QTLs for grain weight identified with the main effect model. Table S10. Cross-validation for determining hyperparameters (a, b) used in QTL mapping for yield per plant. Table S11. Experimentally investigated genes near QTLs for yield per plant identified with the full model. Table S12. Experimentally investigated genes near QTLs for yield per plant identified with the main effect model. (DOC)