NA12878 and MCF7 data for Profiling Chromatin Accessibility in Humans Using Adenine Methylation and Long-Read Sequencing

NIAID Data Ecosystem2026-05-01 收录

染色质可及性分析

表观遗传学测序

数据链接：

https://zenodo.org/record/8407959 数据链接链接失效反馈

官方服务：

资源简介：

This dataset includes 5mC and 6mA frequency data for NA12878 and MCF7 EcoGII-treated chromatin samples sequenced on nanopore r9.4.1.

创建时间：

2023-10-06

Supplementary_Data.xlsx

甲基化测序

表观遗传学测序

Around 20 NSN- or SN-GVOs per replica were collected and processed to obtain hairpin-bisulfite amplicons for major satellites and IAP_LTR1a. Briefly, 100 ng salmon sperm DNA was added as carrier DNA a

NIAID Data Ecosystem20

Transcription factor TCF1 binds Rorgt and orchestrates a regulatory network that determines homeostatic Th17 cell state [ATAC-seq]. Transcription factor TCF1 binds Rorgt and orchestrates a regulatory network that determines homeostatic Th17 cell state [ATAC-seq]

Th17细胞调控

染色质可及性分析

CD4+ T helper 17 (Th17) cells encompass a spectrum of cell states including homeostatic cells that maintain physiological functions such as barrier integrity and pathogenic cells that drive autoimmune

NIAID Data Ecosystem00

Histone methyltransferase SETDB1 safeguards mouse fetal hematopoiesis by suppressing activation of cryptic enhancers [ATAC-seq]. Histone methyltransferase SETDB1 safeguards mouse fetal hematopoiesis by suppressing activation of cryptic enhancers [ATAC-seq]

造血表观遗传学

染色质可及性分析

The H3K9me3-specific histone methyltransferase SETDB1 is critical for proper regulation of developmental processes, but the underlying mechanisms are only partially understood. Here, we show that dele

NIAID Data Ecosystem00

ATAC-seq of HEK293 cells with Alu-motif targeted dCas9GFP. ATAC-seq of HEK293 cells with Alu-motif targeted dCas9GFP

染色质可及性分析

基因调控

HEK293 cells were selected and subcloned for doxycyclin (DOX) and trimethoprim (TMP) inducible dCas9GFP and a guide RNA molecule targeting an EGA enriched Alu-motif (EEA-g1). Cells were treated with D

NIAID Data Ecosystem10

Chromatin accessibility profiling of adult C. elegans in response to heat hormesis regimen

染色质可及性分析

热适应机制

To understand the molecular basis of heat hormesis, we adapted a regimen in which C. elegans that had been cultured at 20Â°C were exposed to 30Â°C for 6 hours during early adulthood (referred to as 'p

NIAID Data Ecosystem00

NA12878 and MCF7 data for Profiling Chromatin Accessibility in Humans Using Adenine Methylation and Long-Read Sequencing

资源简介：

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