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Bovine genome assembly by Cattle Genome Sequencing International Consortium

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agdatacommons.nal.usda.gov2024-11-23 更新2025-03-22 收录
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https://agdatacommons.nal.usda.gov/articles/dataset/Bovine_genome_assembly_by_Cattle_Genome_Sequencing_International_Consortium/25078943/1
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The Cattle Genome Sequencing International Consortium, led by the Baylor College of Medicine, originally sequenced the Bos taurus genome at 6x coverage using a whole genome shotgun (WGS) strategy. The initial assembly (Btau_4.2) was later replaced by newer versions by incorporating high quality finished data, where available (Btau_4.6.1). The latest version takes the UMD 3.1 assembly contigs and scaffolds and incorporates ~19x Pacific Biosciences long-read data using the PBJelly method (English, Richards et al. 2012).

由贝勒医学院领导的国际牛基因组测序联盟,最初采用全基因组鸟枪法(WGS)对牛(Bos taurus)基因组进行了6倍覆盖度的测序。初始组装版本(Btau_4.2)随后被通过整合高质量完成数据的新版本所取代,当可获得时(Btau_4.6.1)。最新版本采用了UMD 3.1组装的连续片段和支架,并利用PBJelly方法(Richards et al., 2012)融合了约19倍覆盖度的太平洋生物科学长读长数据。
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