Segmentations of 3D electron microscopy image volume from an albino mouse dorsal lateral geniculate nucleus

In albino mice and EphB1 knock out mice, mistargeted retinal ganglion cell (RGC) axons form dense islands of axon terminals in the dorsal lateral geniculate nuclei (dLGN). The formation of these islands of retinal input depends on developmental patterns of spontaneous retinal activity. We reconstructed the microcircuitry of the activity-dependent islands and found that the boundaries of the island represent a remarkably strong segregation within retinogeniculate connectivity. We conclude that, when sets of retinal input are established in the wrong part of the dLGN, the developing circuitry responds by forming a synaptically isolated subcircuit within the otherwise fully connected network. The fact that there is a developmental starting condition that can induce a synaptically segregated microcircuit has important implications for our understanding of the organization of visual circuits and for our understanding of the implementation of activity-dependent development., Serial section electron microscopy was used to image a region of the dorsal lateral geniculate nucleus of an adult albino mouse. Images were collected with a 20 nm pixel size and 40 nm section thickness. Cells were reconstructed manually in VAST and rendered using CellNav (https://github.com/MorganLabShare/albinoIsland2025, doi: 10.5281/zenodo.14968598)., , # Segmentations of 3D electron microscopy image volume from an albino mouse dorsal lateral geniculate nucleus

[https://doi.org/10.5061/dryad.j3tx95xs2](https://doi.org/10.5061/dryad.j3tx95xs2)

**Description of the data and file structure**

The KxS dataset is a serial section electron microscopy reconstruction of the albino mouse dorsal lateral geniculate nucleus (dLGN). This dataset was acquired to test the hypothesis that mistargeted retinal ganglion cells form a segregated retinogeniculate circuit in the albino dLGN. The dataset consists of 40nm thick ultrathin sections imaged at 20nm pixel size. The analysis of this data set is presented in :

McCracken S, McCoy L, Hu Z, Hodges J, Valkova K, Williams PR, Morgan J. Mistargeted retinal axons induce a synaptically independent subcircuit in the visual thalamus of albino mice. bioRxiv [Preprint]. 2024 Dec 3:2024.07.15.603571. doi: 10.1101/2024.07.15.603571. PMID: 39071408; PMCID: PMC11275878.

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