TnSEQ analysis measuring fitness costs of insertions in the M. bovis AF2122/97 genome under oxidative stress

Data files for menadione-treated and untreated Tn-seq libraries from M. bovis AF2122/97

Samples:

A1    treated    A1_insertions.wigC1    treated    C1_insertions.wigA2    treated    A2_insertions.wigC2    treated    C2_insertions.wigB1    untreated    B1_insertions.wigD1    untreated    D1_insertions.wigB2    untreated    B2_insertions.wigD2    untreated    D2_insertions.wig

Two independent biological replicates (1 and 2) each with two technical replicates (A and C, B and D)

Raw sequencing files (.fastq.gz): R1 is sequencing read, R2 is index read with molecular barcode

Processed insertion files (.wig) for each sample created with custom pipeline: https://github.com/jenjane118/tnseq_pro