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Structural features of species-specific transposable element insertions in ca. 5.7 Mb of orthologous genomic sequences from the coelacanth species Latimeria chalumnae and L. menadoensis.

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Figshare2015-12-02 更新2026-04-29 收录
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https://figshare.com/articles/dataset/_Structural_features_of_species_specific_transposable_element_insertions_in_ca_5_7_Mb_of_orthologous_genomic_sequences_from_the_coelacanth_species_Latimeria_chalumnae_and_L_menadoensis_/1258027
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ORF = Open Reading Frame; L. ch. = Latimeria chalumnae; L. me. = Latimeria menadoensis; IGR = Intergenic Region; RT = Reverse Transcriptase; APE = Apurinic/Apyrimidic Endonuclease; LTR = Long Terminal Repeat; ND = Not Detected; TSD = Target Site Duplication; *Number of BlastN hits in the analyzed regions, with hit length ≥80% of insertion length and identity ≥80%, criteria that are classically used to define TE families; ** Number of BlastN hits against L. menadoensis testis transcriptome with hit length ≥80 nt and identity ≥95%.Structural features of species-specific transposable element insertions in ca. 5.7 Mb of orthologous genomic sequences from the coelacanth species Latimeria chalumnae and L. menadoensis.
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2015-12-02
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