mRNA and DNAm references for kidney
收藏NIAID Data Ecosystem2026-03-13 收录
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https://figshare.com/articles/dataset/mRNA_and_DNAm_references_for_kidney/14399483
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资源简介:
The data contains a 272-marker expression reference and a 32-marker DNAm reference for Kidney, which can be used to estimate cell type fractions of endothelial cells, epithelial cells, fibroblasts and immune cells in Kidney tissue with EpiSCORE framework.
Kidney_Expref.csvA scRNAseq expression reference for Kidney. Each row is a marker gene (in gene symbol) and each column is a cell type. For each marker gene, the value of the reference matrix is the median expression level for each type of cells in scRNAseq data.
Kidney_Mref.csvA DNAm reference for Kidney. Each row is a marker gene (in entrezID) and each column is a cell type. The last column is the weight for each marker. The value of the matrix is the imputed DNAm level from expression reference.
创建时间:
2021-04-13



