Simulated maps for paper "Emap2sec+: Detecting Protein and DNA/RNA Structures in Cryo-EM Maps of Intermediate Resolution Using Deep Learning"
收藏资源简介:
These folders include simulated EM map files at 6 A and 10 A for 1056 protein-RNA/RNA complex structures. Maps of 6 A are stored in the 'SIMU6' directory while those simulated at 10 A are saved in the 'SIMU10' directory.<br> To verify all the files are downloaded, please go to "SIMU6" and "SIMU10" directory and run the checking script verify_utils.py by "python3 verify_utils.py" to see if the downloading is successful or not.<br> These simulated maps were used in the following paper: Xiao Wang, Eman Alnabati, Tunde W Aderinwale, Sai Raghavendra Maddhuri Venkata Subramaniya, Genki Terashi & Daisuke Kihara. Emap2sec+: Detecting Protein and DNA/RNA Structures in Cryo-EM Maps of Intermediate Resolution Using Deep Learning. Nature Communications (2021).<br> The simulated maps were generated by the pdb2vol program of the SITUS package. Please read the papers for more details.<br> For each PDB entry, 3 files are included: .pdb (PDB file), mrc (simulated map file), and _reso (simulated resolution).<br> For any questions or further assistance, please contact by email to Daisuke Kihara: dkihara@purdue.edu.<br>



