Tree files (as newick and pdf files) and corresponding alignments for "Early eukaryotic origins and metazoan elaboration of MAPR family proteins"

"MAPR_3_protein_alignment_94aa_LG_R5_newick.txt": raw tree file in newick format based on alignment subjected to PREQUAL-filtering and Divvier-clustering. After trimming, the central conserved domain (94 amino acid residues in human PGRCM1) has been extracted and used for tree reconstruction with IQ-TREE (selected model based on ModelFinder: LG+R5). Corresponds to Figure 1 and S1. <br>"MAPR_3_protein_alignment_94aa_LG_R5.tre.pdf": tree as pdf file, colored by lineage and rooted at the NEUFC-clade <br>"MAPR_3_protein_alignment_94aa_trimal0.01.fasta": trimmed 94 aa-alignment used for tree reconstruction <br>"MAPR_3_protein_alignment_126aa_LG_R7_newick.txt": raw tree file in newick format based on 126 amino acid residue alignment after trimming, used for tree reconstruction with IQ-TREE (selected model based on ModelFinder: LG+R7) <br>"MAPR_3_protein_alignment_126aa_LG_R7.tre.pdf": tree as pdf file, colored by lineage and rooted at the NEUFC-clade <br>"MAPR_3_protein_alignment_126aa_trimal0.8.fasta": trimmed 126 aa-alignment used for tree reconstruction