Data and scripts from: Revealing reassortment in influenza A viruses with TreeSort
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https://agdatacommons.nal.usda.gov/articles/dataset/Data_and_scripts_from_Revealing_reassortment_in_influenza_A_viruses_with_TreeSort/28039040
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资源简介：
This repository contains scripts and data to replicate the experiments from<br>Markin, A., Macken, C.A., Baker, A.L., and Anderson, T.K., 2024. <b>Revealing reassortment in influenza A viruses with TreeSort</b>. bioRxiv 2024.11.15.623781; doi: https://doi.org/10.1101/2024.11.15.623781<br><br>For the TreeSort tool and tutorial, see https://github.com/flu-crew/TreeSort.Unzip TreeSort-experiments.zip and see the nested directories and README files for instructions to replicate the study.- See 'simulations' directory for code and instructions to replicate the simulation study.<br>- See 'IAV-reasortment-analysis' directory for data and code to replicate the analysis of reassortment rates and patterns among avian, swine, and human IAV lineages.<br>Contact alexey.markn@usda.gov for questions.<br>
提供机构：
Ag Data Commons
创建时间：
2024-12-17
