Research data supporting "A chemical species ontology for data integration and knowledge discovery"

-ontospecies_aboxes_april2023_allspecies.ttl: data dump in Turtle format that contains information about OntoSpecies ABoxes as of April 2023. It encompasses information on approximately 35,000 species and it provides a wide range of data related to these species. Turtle is a serialization format for RDF data, commonly used to represent semantic information. -ontospecies_aboxes_april2023_500species.ttl: data dump of the OntoSpecies ABoxes subset used for SHACL validation in Turtle format. SHACL is a specification for describing and validating the shapes (structure and constraints) that RDF data should adhere to. -ontospecies_v2-shapesfile.ttl: file that contains SHACL shapes that specify the expected structure and constraints for the data in ontospecies_aboxes_april2023_500species.ttl. -shacl_validation_log.txt: log file of SHACL validation. -OntoSpecies_v2-revised.owl: This file represents a revised version of the OntoSpecies TBox (ontology schema or terminology) after incorporating feedback and comments from reviewers. -use-cases-notebooks.zip: The notebooks in this zip file contain code to reproduce the results of use cases related to the OntoSpecies data and ontology. They can provide guidance on how to work with the OntoSpecies data, perform analyses, and use the ontology for various purposes.