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NexusMancer/NexusMancer-bioai-easykit-gears-cache

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Hugging Face2026-04-23 更新2026-04-26 收录
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https://hf-mirror.com/datasets/NexusMancer/NexusMancer-bioai-easykit-gears-cache
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资源简介:
该数据集提供了GEARS模型所需的预计算`go_essential_all`缓存,是NexusMancer-bioai-easykit项目的一部分,旨在让每个人都能轻松运行GEARS而无需手动生成缓存。数据集包含多个文件,如`go_essential_all.csv`、`essential_all_data_pert_genes.pkl`等,均放置在`gears_cache/go_essential_all/`文件夹结构中。数据来源于公开可用的数据集,包括Gene Ontology (GO)、Norman et al. (2019) Perturb-seq数据集和NCBI gene2go,采用CC BY 4.0许可证。

This dataset provides the pre-computed `go_essential_all` cache required by the GEARS model. It is part of the NexusMancer-bioai-easykit project to make it easy for everyone to run GEARS without manually generating the cache. The dataset includes multiple files such as `go_essential_all.csv`, `essential_all_data_pert_genes.pkl`, etc., all placed under the `gears_cache/go_essential_all/` folder structure. The data is built from publicly available datasets including Gene Ontology (GO), Norman et al. (2019) Perturb-seq dataset, and NCBI gene2go, licensed under CC BY 4.0.
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