Rhizosphere Microbial Shifts and Plant Defense Mechanisms Induced by Bacillus amyloliquefaciens and Salicylic Acid Co-inoculation in Cucumber

This study investigates the impact of Bacillus amyloliquefaciens and salicylic acid co-inoculation on rhizosphere microbial communities and plant defense mechanisms in cucumber (Cucumis sativus). Using amplicon sequencing of 16S rRNA and ITS regions, we analyzed the microbiome shifts in treated and control plants to understand the influence of biocontrol agents on plant growth and resistance against Sclerotinia sclerotiorum.The sequencing data was generated using Illumina MiSeq technology, targeting bacterial and fungal communities. This dataset provides insights into microbial diversity, functional shifts, and their correlation with plant health. The findings contribute to sustainable agriculture by exploring microbial-based strategies for plant disease management.