Additional file 1: Table S1. of Analysis of codon usage bias of envelope glycoprotein genes in nuclear polyhedrosis virus (NPV) and its relation to evolution
Datasets for ProkBERT This repository contains the training, validation, and testing datasets used in our research for ProkBERT, optimized for microbiome studies. There are 4 different datasets: ESKAP
Additional file 6: Table S5. Count of c-di-GMP-associated genes on chromosomes and plasmids. The primary chromosome is defined as the largest replicon of a genome. A "c" at the start of a column name
R scripts and data tables needed to reproduce figures in the manuscript: Comparative analysis of Faecalibacterium prausnitzii genomes shows a high level of genome plasticity and warrants separation in