Ecological drivers of viral diversity and cross-species transmission in marine mammals (supporting data)

Supporting data and code for the paper entitled "Ecological drivers of viral diversity and cross-species transmission in marine mammals". Data Contigs resulting from pipeline (as described in Materials and Methods): final_min_length_0vertebrate_viral_hits.csv: vertebrate viral contigs final_min_length_0non_vertebrate_viral_hits.csv: non-vertebrate viral contigs final_min_length_0all_viral_hits.csv: all contigs combined Metadata: final_min_length_0all_viral_hits.csv: details of samples and additional variables for each sequencing pool vOTUs: cluster_by_genus_len{150/250/400}.csv: vOTUs derived by clustering at all ID thresholds (see Materials and Methods) for three different contig length cutoffs Code Demographics_CommunityComposition_models.Rmd: Code to run GLM of demographic and taxonomic variables against viral richness, PERMANOVA of viral community composition and Mantel test of community composition versus host phylogenetic distance Sharing.Rmd: Code to derive vOTUs from raw contigs, build unipartite virus-host network and run GLMs of network node degree against demographic and taxonomic variables