Additional file 7: of A microbiome case-control study of recurrent acute otitis media identified potentially protective bacterial genera

Table S3. Complete list of significantly differentially abundant OTUs determined by metagenomeSeq. All differentially abundant OTUs between a) MEF and MEF; b) MEF and NPS; c) MER and NPS; d) ECS and MEF are shown with their log fold change, p-values and mean and median abundance. OTUs in bold/grey are those above the selected threshold of at least 0.35% mean or median abundance in at least one group, and were present in both sets of samples where applicable. Set 1 refers to the set of samples were the left or right ear was chosen at random; these numbers are reported in results. Set 2 refers to the set of samples where the opposite ear was chosen; these results were only used for validation of the differentially abundant OTUs from Set 1. (XLSX 29 kb)