Different fibroblast subtypes propel spatially defined ileal inflammation through TNFR1 signalling in murine ileitis

Bioinformatics analysis of scRNA-seq data from WT and DARE mice of 12 weeks of age.

The .zip file contains all the necessary files and scripts to reproduce the analysis and generate the figures. 

Please refer to the ReadMe.txt file for detailed instructions on how to use the provided scripts.