PathTrace Demo (Query)

This is a FASTA-formated file containing 86 enzymes that participate in the nine metabolic pathways in the Case Study of the PathTrace tool (https://github.com/CGU-CERTH/PathTrace).
The nine pathways are the following:- Leucine Biosynthesis I- TCA cycle I (prokaryotic)- Methionine Biosynthesis I- Isoleucine Biosynthesis I (from threonine)- Lysine Biosynthesis I- Biotin Biosynthesis I- Glycolysis V (Pyrococcus)- Lysine Biosynthesis II- Biotin biosynthesis II
The file contains the enzymes of each pathway as a block, starting with the character '#'. You can remove all these lines for a ready-to-use FASTA file, using the following command:
sed '/^#/ d' < PathTrace-Demo-Query.fasta > PathTrace-Demo-Query-clean.fasta