Additional file 1: of The constitutive differential transcriptome of a brain circuit for vocal learning

Table S1. Summary of the numbers of oligos and cDNAs analyzed for each nucleus. Table S2. Summary of the subsets of differential vs. non-differential genes analyzed for each nucleus to establish the p-value cutoffs in Fig. 2. Table S3. List of genes that are differentially regulated in HVC vs. Shelf. Table S4. List of genes that are differentially regulated in RA vs. VLA. Table S5. List of genes that are differentially regulated in nXIIts vs. SSP. Table S6. List of genes that are differentially regulated in Area X vs. VSP. Table S7. Pathways significantly over-represented in HVC. Table S8. Pathways significantly over-represented in RA. Table S9. Pathways significantly over-represented in nXIIts. Table S10. Pathways significantly over-represented in Area X. Table S11. Level 5 Gene Ontology (GO) terms significantly over-represented in HVC. Table S12. Level 5 Gene Ontology (GO) terms significantly over-represented in RA. Table S13. Level 5 Gene Ontology (GO) terms significantly over-represented in nXIIts. Table S14. Level 5 Gene Ontology (GO) terms significantly over-represented in Area X. Table S15. Unique and shared markers of song system nuclei. Table S16. Summary of in situ and array data analyzed to assess gene regulation in Figs. 4-9. (XLSX 244Â kb)