相关数据集
Additional file 13 of METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer
Additional file 13: Supplementary Table S4. tRNA fragment reads in Control (wt) and METTL1 KO cells.
DataCite Commons2024-02-23 更新80
Small RNA seq in epididymis of wild type and Alkbh3-/- mice
Total RNA (100 μg) were denatured at 70 °C for 5 min and separated by a 15% TBE-Urea gel with 20/100 or 10/60 oligo length standard ladder (Integrated DNA Technologies, Coralville, IA). After visualiz
NIAID Data Ecosystem30
Supplementary Table S6 from tRNA Fragments Show Intertwining with mRNAs of Specific Repeat Content and Have Links to Disparities
This file contains the statistics of the length distribution of exons and introns of the genes that are correlated with nuclear and mitochondrial tRFs.
NIAID Data Ecosystem20
Deep sequencing of yeast and mouse tRNAs and tRNA fragments using OTTR
Deep sequencing of tRNAs have historically been nutoriously difficult. Here, we benchmark a newly developed library prep protocol termed OTTR agains intact tRNAs as well as tRNA fragments and show tha
NIAID Data Ecosystem40
TET2 regulates tRNA fragment generation by RNA hydroxymethyl modification
Using CLIP-seq, hm5C RIP-seq, and small RNA-seq, we show that TET2 binds to tRNAs in mouse embryonic stem cells at sites enriched for hm5C. Loss of TET2 causes decreased hm5C on tRNAs and abrogation o
NIAID Data Ecosystem20
