five

scanpy/anndata files for Tabula Microcebus

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DataCite Commons2021-12-17 更新2024-08-18 收录
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https://figshare.com/articles/dataset/Tabula_Microcebus_v1_0/14468196
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资源简介:
We provide the cell by gene count data for the Tabula Microcebus mouse lemur scRNAseq cell atlas in Python’s h5ad and Matlab’s mat formats, as well as scripts to export the files to R’s Seurat format. Datasets are organized as described in https://tabula-microcebus.ds.czbiohub.org/. Datasets can also be explored and reannotated interactively using the cellxgene browser on the same web link.<br><br>LCA_complete_wRaw_toPublish.h5ad contains the entire atlas integrated using the FIRM algorithm (https://www.biorxiv.org/content/10.1101/2020.06.02.129031v2), while the other h5ad objects are individual tissues.<br>
提供机构:
figshare
创建时间:
2021-04-22
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