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Common evolutionary origins of bacGlyRS and AlaRS

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Figshare2023-11-03 更新2026-04-08 收录
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https://figshare.com/articles/dataset/Common_evolutionary_origins_of_bacGlyRS_and_AlaRS/23269007/3
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<b>CLANS input files</b>Files in special ‘CLANS’ format (.clans file) can be loaded into CLANS for visualization of the relationship between proteins based on their all-against-all pairwise sequence similarities.<i>Closest sequence matches to each of the domains of bacGlyRS:</i> catalytic_cluster.CLANS; body-tail_cluster.CLANS; HD_cluster.CLANS; ATL_cluster.CLANS; and ABD_cluster.CLANS.<i>Similarity of bacGlyRS catalytic and ATL domains to archaeal and bacterial uniAlaRS sequences:</i> catalytic_bacGlyRS-AlaRS.CLANS; and ATL_bacGlyRS-AlaRS.CLANS.<b>MSA files</b>Files in FASTA format (.fasta) contain multiple sequence alignments (MSAs) of bacGlyRS and AlaRS sequences that were calculated for a representative set of archaea and bacteria.<b>Spreadsheet file</b>bacGlyRS alpha and beta subunits GenBank identifiers and exact base pair locations of the genes.
提供机构:
Williams, Loren Dean; Petrov, Anton; Alvarez-Carreño, Claudia; Arciniega, Marcelino; Pouplana, Lluís Ribas de; Torres-Larios, Alfredo; Valencia-Sánchez, Marco Igor; Hernandez-Gonzalez, Adriana
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2023-11-03
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