EGP Mitochondrial Genome Analysis on Human Genome Diversity Project Whole-Genome Sequencing Data
收藏Zenodo2024-09-25 更新2026-05-26 收录
下载链接：
https://zenodo.org/doi/10.5281/zenodo.13835738
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资源简介：
Summary: This dataset consists of running EGP version 1.3 on whole-genome sequencing data from the HGDP. The link to EGP is here https://github.com/tycheleturner/ElGenomaPequeno.
Author: Tychele N. Turner, Ph.D.
Short Writeup: EGP version 1.3 on Simons Genome Diversity Project: Short-read WGS CRAM files were downloaded from the EMBL-EBI Public Data Globus Endpoint from the /1000g/ftp/data_collections directory. Post-download, the data was run through EGP version 1.3. The results are shown below:
Public Dataset
EGP Result File Type
MD5
Human Genome Diversity Project
Mitochondrial Genome Fasta Files for MEGA
2b388c1fa446ecec70e33ea0471e06f8
Human Genome Diversity Project
Mitochondrial Genome MitoMaster Result File
50b80ed32b1ae542c8967cc31986dd19
Human Genome Diversity Project
Mitochondrial Genome Variant Tables
995f30b74c4bb094a674b1a994853246
Human Genome Diversity Project
Mitochondrial Genome Copy Number
e79e61efab4c491fa2825b7d1853df58
Please note: I have found that with Zenodo you must use "Download All" for the copy number table to properly open.
提供机构：
Zenodo
创建时间：
2024-09-24
