Structural data of drug molecules for force field AMBER99 used for MD simulations of solubilization into taurocholate/DOPC micelles
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https://zenodo.org/record/14605819
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资源简介:
The dataset includes the following files for the molecules of fenofibrate, progesterone, 17-OH-progesterone, albendazole, paracetamol and ibuprofen:
1) pdb files of the drug molecules after optimization with DFT functional B3LYP and basis set 6-31G*.
2) itp files for AMBER99 force field in GROMACS software.
3) ffbonded_drugs.dat includes extra added bonded paramters for the simulated molecules adopted from GAFF or similar structures.
4) TC_drugs_structures.dat inclueds the information from the rtp file of the force field.
创建时间:
2025-01-06



