Chromosome-scale genome assembly of yuzu (Citrus junos) v1.0
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https://zenodo.org/doi/10.5281/zenodo.18820552
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资源简介：
This dataset contains the chromosome-scale genome assembly (v1.0) and structural annotations of yuzu (Citrus junos).
Methods: Genomic DNA was sequenced using Oxford Nanopore Technologies (ONT) and assembled into contigs using hifiasm. The contigs were scaffolded into pseudochromosomes with RagTag, using the SWO (sweet orange) genome as a reference. Repetitive elements were soft-masked, and structural gene annotation was performed (e.g., using Helixer).
Files included in this repository:
Yuzu_Refseq_v1.0_swo.softmasked.fasta.gz: The chromosome-level genome assembly (soft-masked).
Yuzu_Refseq_v1.0_swo_helixer.gff: Structural gene annotation (GFF format).
Yuzu_Refseq_v1.0_swo_cds.fa: Coding sequences (CDS) of the predicted genes.
Yuzu_Refseq_v1.0_swo_protein.fa: Translated protein sequences.
Yuzu_Refseq_v1.0_swo_transcripts.fa: Transcript sequences.
Yuzu_Refseq_v1.0_swo.fa.out.gff: Annotation of repetitive elements.
提供机构：
Zenodo
创建时间：
2026-03-01
