Profiling of transcription start site expression in Drosophila and the human K562 cell line using RAMPAGE

ChEBI2012-08-29 更新2026-07-21 收录

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RAMPAGE测序技术

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https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-GEOD-36213 数据链接链接失效反馈

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Profiling of transcription start site expression in Drosophila and the human K562 cell line using RAMPAGE

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2012-08-29

Genome-wide transcription start site mapping of Bradyrhizobium japonicum free-living cells and bacteroids - a rich resource to identify new transcripts, proteins and to study gene regulation. Bradyrhizobium diazoefficiens USDA 110

根瘤菌基因调控

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Background: During the symbiosis with legumes, Bradyrhizobium japonicum cells infect roots where they induce the formation of root nodules and differentiate into intracellular nitrogen-fixing bacteroi

NIAID Data Ecosystem90

CAGE-Seq of gonads and carcasses from D. melanogaster and D. pseudoobscura

基因表达

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We performed CAGE-Seq on dissected ovaries and testes as well as female and male carcasses of two species of Drosophila (D. melanogaster and D. pseudoobscura). These data are used to map transcriptio

干细胞与再生医学数据中心2022-02-20 更新70

Additional file 14: Table S10. of Identification and annotation of conserved promoters and macrophage-expressed genes in the pig genome

基因组功能注释

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Mapping locations of the pig CAGE CTSS to the pig genome: multimapped subset (BED). Table contains the following columns (left to right): chromosome, start, end, pig CAGE CTSS ID (strand-specific), nu

NIAID Data Ecosystem40

Re-processing of the data generated by the FANTOM5 project (hg38 v3)_CAGE_peaks_annotation

基因表达

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Annotation files = Transcript association * (Human phase1+2 set) hg38_liftover+new_CAGE_peaks_phase1and2_trans.txt (Format) 1) CAGE peak ID "(Old FANTOM5 CAGE Peak ID);(new TSS ID)" 2) Associated

Figshare2017-04-17 更新70

Genome-Wide Identification of Transcription Start Sites, Promoters and Transcription Factor Binding Sites in E. coli

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大肠杆菌基因

Despite almost 40 years of molecular genetics research in Escherichia coli a major fraction of its Transcription Start Sites (TSSs) are still unknown, limiting therefore our understanding of the regul

NIAID Data Ecosystem60

Profiling of transcription start site expression in Drosophila and the human K562 cell line using RAMPAGE

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