Characteristics of all codons analysed: Sensitivity to host immunity, within- and between-host diversity, and the number of times the codon was inferred under selection
Rapid dissemination of SARS-CoV-2 sequencing data to public repositories has enabled widespread study of viral genomes, but studies of longitudinal specimens from infected persons are relatively limit
Resolving complex plant pathogen genomes is important for identifying the genomic shifts associated with rapid adaptation to selective agents such as host and fungicide, yet assembling these genomes r
Multiple sequence alignment of Pseudomonas aeruginosa Liverpool Epidemic Strain isolates sampling separate populations from two chronically infected cystic fibrosis patients in Phylip format compresse
A summary of the number of codon sites identified by the SLAC method implemented in by HyPhy [50] that show positive or negative selection at the APOBEC3 and non-APOBEC3 motifs in the regions of the G
