Datasets_for_Narragansett_Bay_18S_analysis

Environmental data from Narragansett Bay compiled from Rynearson et al., 2020, Narragansett Bay time series website (https://web.uri.edu/gso/research/plankton/data/), National Data Buoy Centers station QPTR1 – 8454049 at nearby Quonset Point (https://www.ndbc.noaa.gov/station_page.php?station=qptr1), and the National Research Reserve System’s Central Data Management Office website (https://cdmo.baruch.sc.edu/dges/) for station NARPCMET.<br>Analysis of the sequence data can be found in: Scripts_for_Narragansett_Bay_18S_analysis<br>"metadata.csv" - Metadata given in Rynearson et al., 2020."NARPCMET.csv" - Irradiance data downloaded from NERRS"easy_name_NB_count.csv" - Count data from denoised amplicons with row names changed to asv#"rep_asv.fasta" - Representative sequences for each ASV output from DADA2."chl_a_raw.csv" - Chlorophyll a data from NERRS<br>citation for Rynearson et al., 2020:Rynearson TA, Flickinger SA, Fontaine DN. Metabarcoding Reveals Temporal Patterns of Community Composition and Realized Thermal Niches of Thalassiosira Spp.(Bacillariophyceae) from the Narragansett Bay Long-Term Plankton Time Series. Biology. 2020 Jan;9(1):19.<br><br><br>