Potential functional indels and complex variants in genes.

NIAID Data Ecosystem2026-03-07 收录

变异功能分析

基因组indel检测

数据链接：

https://figshare.com/articles/dataset/_Potential_functional_indels_and_complex_variants_in_genes_/212526 数据链接链接失效反馈

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资源简介：

Number in brackets indicates the number of genes affected.

创建时间：

2012-11-15

Additional file 1 of Genome-wide detection of signatures of selection in indicine and Brazilian locally adapted taurine cattle breeds using whole-genome re-sequencing data

基因组选择信号检测

变异功能分析

Additional file 1. Distribution of the functional consequences of the called variants (n = 33,328,447 SNPs) using the Variant Effect Predictor (VEP) tool.

DataCite Commons2020-09-12 更新120

RNA-Seq of mouse embryonic stem cells derived from genetically diverse inbred mouse strains with varying alleles at Lifr gene. RNA-Seq of mouse embryonic stem cells derived from genetically diverse inbred mouse strains with varying alleles at Lifr gene

干细胞转录组学

变异功能分析

We measured genome-wide gene expression of embryonic stem cells derived from two different inbred mouse genetic backgrounds. For each genetic background we also conducted an allele swap at SNP rs50454

NIAID Data Ecosystem70

Assessment of pathogenicity of missense variants identified in this study.

变异致病性评估

变异功能分析

Assessment of pathogenicity of missense variants identified in this study.

NIAID Data Ecosystem50

Additional file 5: Table S4. of ScanIndel: a hybrid framework for indel detection via gapped alignment, split reads and de novo assembly

基因组indel检测

高通量测序

Indel detection by ScanIndel with 2â Ă â 150-bp amplicon sequencing reads. (XLSX 44 kb)

Figshare2016-12-16 更新80

Additional file 2 of Deciphering the impact of genetic variation on human polyadenylation using APARENT2