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Chromatin accessibility dictates specific transcriptional response by different cells of the innate immune system. Chromatin accessibility dictates specific transcriptional response by different cells of the innate immune system

NIAID Data Ecosystem2026-03-11 收录

染色质可及性分析

免疫细胞转录组调控

数据链接：

https://www.ncbi.nlm.nih.gov/bioproject/PRJNA613711 数据链接链接失效反馈

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资源简介：

This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series

应用场景：

创建时间：

2020-03-20

染色质可及性分析

G-四链体应激响应

We analyze the contribution of ATRX, DAXX and HIRA to the chromatin accessibility at G-quadruplex in mESC We analyze the contribution of ATRX and ESET to the chromatin accessibility at G-quadruplex in

NIAID Data Ecosystem10

Genome-wide maps of chromatin state in WT and Whsc1 ko or Nlrc5 ko CT26 cells [ATAC-seq]. Genome-wide maps of chromatin state in WT and Whsc1 ko or Nlrc5 ko CT26 cells [ATAC-seq]

染色质可及性分析

癌症免疫机制

Histone dimethyl transferase WHSC1 drives the transcription of MHC-I machinery in mouse and human colorectal cancer cells (CRCs); thus, WHSC1 downregulation potentiates CRCs to escape from cytotoxic C

NIAID Data Ecosystem10

Additional file 6 of ATAC-seq normalization method can significantly affect differential accessibility analysis and interpretation

染色质可及性分析

ATAC-seq

Additional file 6. csaw_workflow.R—Example R workflow for differential accessibility analysis with csaw as graphically displayed in Fig. 6. Describes process for both TMM and loess normalizations and

Figshare2020-04-23 更新00

Chromatin Accessibility differentiates Invasive Lobular from Invasive Ductal Breast cancer and Dictates Response to Endocrine Treatment. Chromatin Accessibility differentiates Invasive Lobular from Invasive Ductal Breast cancer and Dictates Response to Endocrine Treatment

乳腺癌分子亚型分型

染色质可及性分析

This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series

NIAID Data Ecosystem10

Additional file 12 of Dynamic transcriptome analysis reveals signatures of paradoxical effect of vemurafenib on human dermal fibroblasts

药物转录组学

染色质可及性分析

Additional file 11: Tables S11A–B. Over-represented biological processes among genes with differentially accessible regions in HDF after vemurafenib treatment, in comparison to the corresponding time-

Figshare2021-12-21 更新10

Chromatin accessibility dictates specific transcriptional response by different cells of the innate immune system. Chromatin accessibility dictates specific transcriptional response by different cells of the innate immune system

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