Cerberus reference data v0.1.0 — masked T2T-CHM13v2.0 + IPD-IMGT/HLA, Kraken2 GDPR DB, auxiliary k-mer references

Name: Cerberus reference data v0.1.0 — masked T2T-CHM13v2.0 + IPD-IMGT/HLA, Kraken2 GDPR DB, auxiliary k-mer references
Creator: Zenodo
Published: 2026-05-17 14:30:25
License: 暂无描述

Zenodo2026-05-17 更新2026-05-26 收录

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https://zenodo.org/doi/10.5281/zenodo.20258068

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资源简介：

Reference data bundle for Cerberus, a three-headed host-removal pipeline for metagenomic data. Contents: masked_t2t_hla.mmi — minimap2 index of T2T-CHM13v2.0 + IPD-IMGT/HLA, low-entropy and viral-homology masked. masked_t2t_hla_bt2.tar.zst — bowtie2 index of the same reference. kraken2_gdpr_compact.tar.zst — compact Kraken2 database covering human (T2T-CHM13v2.0), chimpanzee, gorilla, mouse, and rat for GDPR-pass host scrubbing. aux_refs.fa.gz — Human host-decoy ncRNA (rRNA, snRNA, snoRNA, miRNA, Y_RNA, vaultRNA) + mitochondrion (NC_012920.1). human_k27.fa.gz — Full T2T-CHM13v2.0 used as bbduk k-mer reference in Cerberus's GDPR pass (orthogonal k=31 mechanism alongside Kraken2). Source build scripts: scripts/build_refs/.

提供机构：

Zenodo

创建时间：

2026-05-17