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Alignment of archaeal marker genes

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DataCite Commons2020-08-27 更新2024-07-27 收录
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FASTA file of the alignment underlying the phylogenetic tree that appears in Figure 3 of Santoro et al. 2019. The alignment is constructed from 32 concatenated proteins from 1360 archaeal genomes, including metagenome-assembled genomes, single-cell genomes, and cultivated isolates obtained from NCBI GenBank and the Joint Genome Institute's Integrated Microbial Genomes (IMG) portal. Phylogenetic markers were selected using hmmsearch against AMPHORA2 markers.

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figshare
创建时间:
2019-07-02
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