Intraspecific temporal comparisons for sheep and goat. Size is assessed using pairwise Wilcoxon tests. Shape variation was evaluated using MANOVA. Variance in size and shape was calculated via linear
AllGMRF_reduced.trees is the tree posterior for all 164 samples downsampled to 500 trees. MCC.tree is the maximum clade credibility tree for all 164 samples. PhyMLTreeFinal.tree is the ML tree of all
A common challenge in phylogenetic reconstruction is to find enough suitable genomic markers to reliably trace splitting events with short internodes. Here we present phylogenetic analyses based on ge