Example of dataset extracted using vCircTrappist.

This example displays the data obtained for MDV, as in Figure 1 and S7E. The three first columns represent the backsplice junction and the backsplice sites. The « Count » column represent the raw number of reads mapping the backsplice junction without normalization. The Sense_score column is calculated based on the strand which is covered by the reads mapping the backsplice junction. The U2_score is calculated based on the distance of the backsplicing site from a canonical splicing site. The 5’ and 3’ position are the positions of the splicing sites and they determine the Max_CircRNA_Size. The « Colocalized Gene » column requires a completed GFF file to determine the colocalizing genes. The « Longest Common Kmer » was identified comparing the backsplice sites and the « Common Sequences » were extracted accordingly. The « Chromosome » is the viral genome reference on which the backsplice junction was identified. The identifiers of the reads are available in the SAM alignment file. (CSV)