Datasets for a transposon origin of large tandem repeats in Papilio bianor
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=== Content description === Folders: 01.0.mito The folder storing the mitochondrial genome assembly 04.0.final_assembly Details of the final primary assembly. Including the assembly fasta file, busco scores, gaps, gc content, telomeric motifs 05.0.satellite.moddotplot This folder contains three .cool files storing moddotplot similarity scores. .cool files are manipulated by the cooler package from Python 05.4.satellite.repeatmodeler & 05.5.satellite.repeatmasker The standard outputs of RepeatModeler2 and RepeatMasker Files: inter_30.hic The Hi-C contact matrices using the Juicer pipeline inter_30.multires.mcool & inter_30.multires.VC_SQRT.mcool Multiresolution cooler files storing the same Hi-C matrices data, alongside normalized contact in two ways (VC and SQRT)



