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Immigration and cyclical bottlenecks: High inbreeding despite high genetic diversity in an oscillating population of the biting midge, Culicoides sonorensis (Diptera: Ceratopogonidae)

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agdatacommons.nal.usda.gov2023-11-30 更新2025-03-22 收录
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https://agdatacommons.nal.usda.gov/articles/dataset/Immigration_and_cyclical_bottlenecks_High_inbreeding_despite_high_genetic_diversity_in_an_oscillating_population_of_the_biting_midge_Culicoides_sonorensis_Diptera_Ceratopogonidae_/24668667/1
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These data represent the microsatellite peak calls generated after genotyping the specimens, as well as, the outputs from downstream analyses and the metadata used to construct some of the figures and tables. The microsatellite data can be found in "Shults_2023_peak_calls.xlsx" and contains the identity of each peak scored scored using Geneious v.9.1 software. An "x" represents no peak call at that marker for that individual. These data were used as input for all of the subsequent population genetic analyses. All of the data used to create the tables and figures of the manuscript can be found in "Shults_2023_tables_figs.xlsx". Resources in this dataset: Resource Title: Microsatellite peak calls File Name: Shults_2023_peak_calls.xlsx Resource Description: Contained in this file are all of the individual specimens (rows) genotype during this project. An "x" represents an uncalled peak for that specific marker. Resource Title: Tables and Figures File Name: Shults_2023_tables_figs.xlsx Resource Description: Contained in this file are all of the metadata used to create the tales and figures from the manuscript. Each tab is labeled with the corresponding information and IBT stands for isolation by time.

本数据集收录了在样本基因分型后生成的微卫星峰调用信息,以及下游分析的输出结果和构建部分图表所需的元数据。微卫星数据存储于名为“Shults_2023_peak_calls.xlsx”的文件中,其中包含使用Geneious v.9.1软件评分的每个峰点的身份信息。在此标记处,个体无峰调用时以“x”表示。这些数据被用作后续种群遗传学分析的输入。用于创建手稿中表格和图表的所有数据均可在“Shults_2023_tables_figs.xlsx”文件中找到。
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