Supplementary Table Chapter 4 - Coco Duizer

Supplementary Table Chapter 4 - Coco Duizer Table S2. DEG ORA HT29 ADP-heptose.Differentially expressed genes (DEG) in HT-29 cells after stimulation with ADP-heptose as calculated using DESeq2. Genes with a minimum fold-change of 2 with a false discovery rate of 0.05 as calculated by Benjamini-Hochberg correction are shown. Upregulated genes are shown in green, downregulated genes are shown in red. Differentially regulated pathways and genesets as calculated by KEGG or MSigDB over-representation (ORA) analysis in HT-29 cells following stimulation with ADP-heptose. Genes with a minimum fold-change of 1 with a false discovery rate of 0.05 as calculated by Benjamini-Hochberg correction are included. Pathways and geneset with an adjusted p value of <0.05 are shown.