Data for the manuscript "Direct visualization of colloid transport over natural heterogeneous and artificial smooth rock surfaces"

The files contain the data used to produce the figures in the manuscript "<strong>Direct visualization of colloid transport over natural heterogeneous and artificial smooth rock surfaces</strong>" by Borgman, Be'er, and Weisbrod. Included in the data set: ImageAnalysesAndPlots.m: A MATLAB script to generate the figures from the included images and data files. myCmap.mat: A custom set of colors for the images. LH_btc.csv, LH_b_btc.csv, HH_btc.csv, HH_b_btc.csv: Data for the breakthrough curves. LH_t=360min.czi, HH_t=300min.czi: Final images from the experiments, from which the residual surface fluorescence is calculated. LHSurfTopo.csv, HHSurfTopo.csv: Tables containing the profilometer scan data. LH, HH: Folders containing the images for the colloid displacement front Exp01-Exp04: Images for calculating the dispersion coefficient PlotVelocities2.m: A script for plotting the calculated velocity fields velocity_magnitude_HH_flux_boundary.txt/velocity_magnitude_LH_flux_boundary.txt: The data files for the velocity fields. For the .czi files, it's necessary to use the Bio-Formats for MATLAB package.