Building <i>in vitro</i> tools for livestock genomics: chromosomal variation within the PK15 cell line

Data from "Building in vitro tools for livestock genomics: chromosomal variation within the PK15 cell line" Coverage files from whole-genome sequencing The coverage textfiles are bedtools coverage output from whole-genome sequencing of two PK15 samples (university laboratory and ATCC), and of fibroblasts. Variants called from whole-genome sequencing A vcf file of variants called from whole-genome sequencing of two PK15 samples (university laboratory and ATCC), and of fibroblasts. The "_AD.txt" files contain allelic coverage depth extracted from these variants by means of bcftools query. Variants called from RNA sequencing A vcf file of SNPs called from publicly available PK15 sequencing. Also, allelic coverage depth file extracted from these variants by means of bcftools query.