Multimodal integration of single cell ATAC-seq data enables highly accurate delineation of clinically relevant tumor cell subpopulations

Data used for tutorial. fragments.tsv.gz(.tbi), singlecell.csv, filtered_peak_bc_matrix.h5: scATAC-seq pre-processing and cell annotation peak.mat.rds: corrected chromatin accessibility profile cancer.cnv.csv: copy number profile of cancer cells .assignment.txt, .clones.txt: cluster assignment, and genotype of each cluster by the CBM method (https://github.com/zhyu-lab/cbm) snv.mat.rds, denoised.mat.rds: raw and denoised SNV matrix