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Genome assemblies of 12 tetraploid wheat accessions

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Zenodo2026-05-12 更新2026-05-26 收录
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We selected 12 tetraploid wheat accessions (Triticum turgidum L., BBAA) for de novo genome assembly. The genomes were assembled using PacBio HiFi,ONT Ultra long-read sequencing technology. Initial contigs were generated using Hifiasm, followed by scaffolding and polishing. Data Content The repository includes: Assembly Sequences: FASTA files (.fasta.gz) for all 12 accessions. Annotations: High confident gene structure annotations (HC.gff3) for the assembled genomes. Assembly and annotation statistics for the 12 tetraploid wheat genomes. Accession name Type Subspecies Assembly size (Gb) Contig N50 (Mb) No. of HC-genes Kronos Free-threshing Triticum durum 10.82 172.76 85,172 XM001097 Free-threshing Triticum turanicum 10.49 38.24 85,640 NU00021 Free-threshing Triticum carthlicum 10.50 48.26 84,714 IG77365 Free-threshing Triticum aethiopicum 10.45 37.87 84,531 XM000719 Free-threshing Triticum polonicum 10.65 46.46 89,423 XM000834 Free-threshing Triticum turgidum 10.51 49.32 84,608 PI294478 Domesticated Triticum ispahanicum 10.51 43.62 85,045 PI330553 Domesticated Triticum karamyschevii 10.47 38.44 78,276 IG99236 Domesticated Triticum dicoccon 10.46 35.79 84,451 NU01905 Wild emmer wheat Triticum dicoccoides 10.61 46.26 84,777 NU01954 Wild emmer wheat Triticum dicoccoides 10.56 49.81 83,408 Zavitan Wild emmer wheat Triticum dicoccoides 10.51 41.17 78,379

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创建时间:
2026-05-12
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