Input data for Atollgen pipeline
收藏DataCite Commons2022-11-12 更新2024-08-18 收录
下载链接：
https://figshare.com/articles/dataset/Input_data_for_Atollgen_pipeline/21443805/1
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资源简介：
This dataset contains the AtollGen pipeline inputs, including : <br> - sources.tar.xz : all data used for AtollGen pipeline - abioteau (fasta files and csv file) - iceberg (v1.0: html files) - iceberg_v2 (v2.0: fasta file) - islander (sql dump and sqlite file) - iv4 (csv files) - jlao (FirmiData: fasta files and xlsx files) - int.hmm / mob.hmm : hmm files for integration and other mobility modules - hmm_signature_categs.json : mapping file between signatures recorded in mobility modules hmm file and mobility module categorisation - Pfam-A.hmm.gz : Pfam-A v34.0 frozen version - card.json : CARD antibiotic resistance collection file <br> Defense Finder models (v0.0.3) can be fecthed via macsyfinder download utility (macsydata) on github : https://github.com/gem-pasteur/macsyfinder
提供机构：
figshare
创建时间：
2022-11-12
