Additional file 2 of Comparative analysis of de novo genomes reveals dynamic intra-species divergence of NLRs in pepper

Additional file 2: Table S1. Reference disease resistance genes used in this study. Table S2. Statistics of raw data used in this study. Table S3. K-mer frequency of ECW and SF. Table S4. Validation of genome assembly and gene annotation using BUSCO. Table S5. Comparison of predicted genes using published annotation database. Table S6. Summary of repeat annotation. Table S7. Number of orthologs per species. Table S8. Number of specific genes containing functional domains of ECW and SF in C. annuum.Table S9. Assigned NLR group and NB-ARC type. Table S10. Statistics of classified NLRs in C. annuum.Table S11. Ortholog pair of NLRs between five accessions in C. annuum.Table S12. Statistics of enriched group of NLRs per 1 Mb window. Table S13. List of significant CNV regions for NLRs.